359 research outputs found

    Active hard-spheres in infinitely many dimensions

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    Few equilibrium --even less so nonequilibrium-- statistical-mechanical models with continuous degrees of freedom can be solved exactly. Classical hard-spheres in infinitely many space dimensions are a notable exception. We show that even without resorting to a Boltzmann distribution, dimensionality is a powerful organizing device to explore the stationary properties of active hard-spheres evolving far from equilibrium. In infinite dimensions, we compute exactly the stationary state properties that govern and characterize the collective behavior of active hard-spheres: the structure factor and the equation of state for the pressure. In turn, this allows us to account for motility-induced phase-separation. Finally, we determine the crowding density at which the effective propulsion of a particle vanishes.Comment: Main text : 6 pages, 2 figures. Supplemental material : 7 pages, 2 figure

    Members of a Large Retroposon Family Are Determinants of Post-Transcriptional Gene Expression in Leishmania

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    Trypanosomatids are unicellular protists that include the human pathogens Leishmania spp. (leishmaniasis), Trypanosoma brucei (sleeping sickness), and Trypanosoma cruzi (Chagas disease). Analysis of their recently completed genomes confirmed the presence of non–long-terminal repeat retrotransposons, also called retroposons. Using the 79-bp signature sequence common to all trypanosomatid retroposons as bait, we identified in the Leishmania major genome two new large families of small elements—LmSIDER1 (785 copies) and LmSIDER2 (1,073 copies)—that fulfill all the characteristics of extinct trypanosomatid retroposons. LmSIDERs are ∼70 times more abundant in L. major compared to T. brucei and are found almost exclusively within the 3′-untranslated regions (3′UTRs) of L. major mRNAs. We provide experimental evidence that LmSIDER2 act as mRNA instability elements and that LmSIDER2-containing mRNAs are generally expressed at lower levels compared to the non-LmSIDER2 mRNAs. The considerable expansion of LmSIDERs within 3′UTRs in an organism lacking transcriptional control and their role in regulating mRNA stability indicate that Leishmania have probably recycled these short retroposons to globally modulate the expression of a number of genes. To our knowledge, this is the first example in eukaryotes of the domestication and expansion of a family of mobile elements that have evolved to fulfill a critical cellular function

    Ocorrência de anticorpos anti-Neospora caninum e anti-Toxoplasma gondii em cães com leishmaniose visceral

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    Uninfected dogs and those naturally infected with Leishmania chagasi exhibiting different clinical forms of disease were evaluated for the presence of anti-Neospora caninum and anti-Toxoplasma gondii antibodies. Blood samples were collected from 110 mongrel dogs. Sera were tested using the indirect fluorescent antibody test (IFAT), and the animals with visceral leishmaniasis (VL) (n=60) were classified clinically. Out of the 110 sera investigated, 5 (4.5%) were positive for N. caninum (IFAT≥50) and 36 (32.7%) for T. gondii (IFAT≥16). Anti-L. chagasi antibody titers in asymptomatic dogs (n=10) were found to be significantly lower (P<0.05) than those in oligosymptomatic ones (n=22), which were in turn significantly lower (P<0.05) than those in symptomatic ones (n=28). No association between Leishmania and N. caninum infections was observed. Among dogs infected with L. chagasi, a tendency (P=0.053) towards an association between the infection with T. gondii and the appearance of VL symptoms was observed, suggesting that the clinical manifestation of VL in dogs may enhance their susceptibility to T. gondii. The possible influence of the immunosuppressive status of canine leishmaniasis in the different clinical forms of the disease is discussed.A presença de anticorpos anti-Neospora caninum e anti-Toxoplasma gondii foi avaliada em cães não infectados e naturalmente infectados com Leishmania chagasi manifestando diferentes formas clínicas da enfermidade. Amostras de sangue foram coletadas de 110 cães sem raça definida. Os soros foram avaliados por meio da reação de imunofluorescência indireta (RIFI) e os animais com leishmaniose visceral (LV) (n=60) foram classificados clinicamente. Dos 110 soros analisados, 5 (4,5%) foram reativos para N. caninum (RIFI≥50) e 36 (32,7%) para T. gondii (RIFI≥16). Os títulos de anticorpos anti-L. chagasi em cães assintomáticos (n=10) foram significativamente (P<0,05) mais baixos que aqueles verificados em oligossintomáticos (n=22), que por sua vez foram significativamente menores (P<0,05) que em cães sintomáticos (n=28). Não foi observada associação entre infecções por Leishmania e N. caninum. Entre os cães infectados com L. chagasi, verificou-se uma tendência de associação (P=0.053) entre infecção com T. gondii e aparecimento de sinais clínicos da LV, o que sugere que a manifestação clínica da LV em cães pode aumentar sua susceptibilidade ao T. gondii. A provável influência do quadro de imunossupressão em diferentes formas clínicas da leishmaniose canina é abordada

    GreEn-ER–Electricity consumption data of a tertiary building

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    The increased use of intermittent renewable energy sources makes the use of machine learning methods combined with demand-side management more and more frequent. Machine learning algorithms rely on data to identify patterns and learn insights. Hence, data availability is of utmost importance, and the more, the merrier. Therefore, this data report aims to present a dataset concerning the electricity consumption of a tertiary building located in the French Alps region (Grenoble) in 2017 and 2018. It is a massively monitored and controlled building with about 330 electricity meters, whose measurement data constitute the dataset. The data were collected directly from the building management system and correspond to raw data, without any pre-treatment. The dataset also includes Python notebooks that allow for understanding the system design, navigating the data, and performing some simple analyses. This is a publicly available dataset that tries to fill the gap of the availability of electricity consumption data, especially regarding tertiary buildings

    Superconducting routing platform for large-scale integration of quantum technologies

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    To reach large-scale quantum computing, three-dimensional integration of scalable qubit arrays and their control electronics in multi-chip assemblies is promising. Within these assemblies, the use of superconducting interconnections, as routing layers, offers interesting perspective in terms of (1) thermal management to protect the qubits from control electronics self-heating, (2) passive device performance with significant increase of quality factors and (3) density rise of low and high frequency signals thanks to minimal dispersion. We report on the fabrication, using 200 mm silicon wafer technologies, of a multi-layer routing platform designed for the hybridization of spin qubit and control electronics chips. A routing level couples the qubits and the control circuits through one layer of Al0.995Cu0.005 and superconducting layers of TiN, Nb or NbN, connected between them by W-based vias. Wafer-level parametric tests at 300 K validate the yield of these technologies and low temperature electrical measurements in cryostat are used to extract the superconducting properties of the routing layers. Preliminary low temperature radio-frequency characterizations of superconducting passive elements, embedded in these routing levels, are presented

    A food web model for the Baffin Bay coastal and shelf ecosystem. Part 1 : Ecopath Technical Report

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    This work was undertaken as part of a multidisciplinary research project funded by the Marine Observation Prediction and Assessment Network - MEOPAR (at ULaval), Canadian Institute of Health Research – CIHR (at University of Ottawa), and Sentinel North (at ULaval), and hosted at Université Laval, in Canada. The objective of the overall project is to support the food security (i.e., the availability and access to sufficient, safe, nutritious food that meets dietary preference) of Inuit communities of the Eastern Canadian Arctic, as well as to explore ways to adapt to effects of climate change. Inuit fish and hunt local marine species, from invertebrates to fish and marine mammals, which make a large part of their diet and are central to their food security. With temperatures increasing twice as fast as the global average and sea ice becoming thinner and forming later, climate change effects on the distribution and abundance of Arctic marine species are already taking place. To better understand the effects of climate change in important subsistence species, a multi-species model (Ecopath with Ecosim) will be used to inform the development of an integrated ecosystem assessment. The model will be used as a tool to co-create scenarios of ecosystem change with the community of Qikiqtarjuaq, Nunavut, to inform adaptation strategies regarding food security (e.g., potential of new fisheries in the region). This report describes the development of an Ecopath model of the Baffin Bay coastal and shelf ecosystem. The methodology, data used to construct the model, data gaps and limitations are described

    Comparative investigation of the pathogenicity of three Mycobacterium tuberculosis mutants defective in the synthesis of p-hydroxybenzoic acid derivatives.

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    p-Hydroxybenzoic acid derivatives (p-HBADs) are glycoconjugates secreted by all Mycobacterium tuberculosis isolates whose contribution to pathogenicity remains to be determined. The pathogenicity of three transposon mutants of M. tuberculosis deficient in the biosynthesis of some or all forms of p-HBADs was studied. Whilst the mutants grew similarly to the wild-type strain in macrophages and C57BL/6 mice, two of the mutants induced a more severe and diffuse inflammation in the lungs. The lack of production of some or all forms of p-HBADs in these two mutants also correlated with an increased secretion of the pro-inflammatory cytokines tumour-necrosis factor α, interleukin 6 and interleukin 12 in vivo. We propose that the loss of production of p-HBADs by tubercle bacilli results in their diminished ability to suppress the pro-inflammatory response to infection and that this ultimately provokes extensive pulmonary lesions in the C57BL/6 model of tuberculosis infection
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